DNBSEQ-G400 paired end sequencing of SAMD00647302 - SRA

DRX489534: DNBSEQ-G400 paired end sequencing of SAMD00647302
1 DNBSEQ (DNBSEQ-G400) run: 22M spots, 6.6G bases, 4.5Gb downloads

Submitted by: RIKEN_CSRS

Study: Transcriptome, Metabolome, and Hormonome Analyses of Rice Calli

PRJDB16708 • DRP012054 • All experiments • All runs

show Abstracthide Abstract

We conducted multiomics studies on cultivated rice (Oryza sativa ssp. japonica) calli at various timepoints and culture conditions.

Sample: h_Os_3wk2

SAMD00647302 • DRS407565 • All experiments • All runs

Organism: Oryza sativa Japonica Group

Library:

Name: h_Os_3wk2

Instrument: DNBSEQ-G400

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: Oligo-dT

Layout: PAIRED

Construction protocol: RNA was harvested using Rneasy mini plus kit (Qiagen). 2~5 ug of total RNA was used for the construction of sequencing libraries. RNA libraries for RNA-seq were prepared using NEXTflex Rapid Directional RNA-seq kit (v2.0; PerkinElmer) following manufacturer's protocols.

Runs: 1 run, 22M spots, 6.6G bases, 4.5Gb

Run	# of Spots	# of Bases	Size	Published
DRR505624	21,959,511	6.6G	4.5Gb	2024-09-25

ID:: 35358863

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity